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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by VectorBase

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Gene: MMP1 AGAP006904

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Description

matrix metalloprotease 1

Location

Chromosome 2L: 39,815,884-39,838,118 forward strand.

AgamP4:CM000356.1

About this gene

This gene has 3 transcripts (splice variants), 135 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	AGAP006904-RA	3741	570aa	AGAP006904-PA	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6JXI6 C6JXI7 C6JXK3 Q7QIJ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	AGAP006904-RB	3415	570aa	AGAP006904-PB	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7QIJ4	-	-
-	AGAP006904-RC	3268	570aa	AGAP006904-PC	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7QIJ4	-	-

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Summary

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