Description

syntaxin-binding protein [Source:VB External Description;Acc:AGAP000009]

Location
About this transcript

This transcript has 22 exons, is annotated with 35 domains and features, is associated with 7 variations and maps to 38 oligo probes.

Gene

This transcript is a product of gene AGAP000009 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000009-RA42271269aaAGAP000009-PA
 
Protein coding
Q7PRW8 XM_311151.5
XP_311151.5
NovelAGAP000009-RC40321204aaAGAP000009-PC
 
Protein coding
F5HJT8 XM_003436849.1
XP_003436897.1
NovelAGAP000009-RB37411107aaAGAP000009-PB
 
Protein coding
F5HJT9 XM_003436848.1
XP_003436896.1
Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,741 bps, Translation length: 1,107 residues

Version

AGAP000009-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays