Location
About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 5 variations and maps to 35 oligo probes.

Gene

This transcript is a product of gene AGAP000086 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000086-RB1259229aaAGAP000086-PB
 
Protein coding
F5HJS5 XM_003436864.1
XP_003436912.1
NovelAGAP000086-RC1147174aaAGAP000086-PC
 
Protein coding
Q5TUU9 XM_003436863.1
XM_566336.2
XP_003436911.1
XP_566336.2
NovelAGAP000086-RD1140379aaAGAP000086-PD
 
Protein coding
F5HJS2 XM_003436862.1
XP_003436910.1
NovelAGAP000086-RA853174aaAGAP000086-PA
 
Protein coding
Q5TUU9 XM_003436863.1
XM_566336.2
XP_003436911.1
XP_566336.2
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,140 bps, Translation length: 379 residues

Version

AGAP000086-RD.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays