Description

C-Type Lectin (CTL) [Source:VB Community Annotation;Acc:AGAP000123]

Location
About this transcript

This transcript has 9 exons, is annotated with 52 domains and features, is associated with 23 variations and maps to 33 oligo probes.

Gene

This transcript is a product of gene AGAP000123 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
CTLSE2AGAP000123-RA2961986aaAGAP000123-PA
 
Protein coding
Q7PFW4 XM_311022.4
XM_566293.2
XP_311022.5
Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,961 bps, Translation length: 986 residues

Version

AGAP000123-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays