Description

amidophosphoribosyltransferase [Source:VB External Description;Acc:AGAP000179]

Location
About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 9 variations and maps to 32 oligo probes.

Gene

This transcript is a product of gene AGAP000179 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000179-RC2362543aaAGAP000179-PC
 
Protein coding
F5HJQ3 XM_003436883.1
XM_003436884.1
XP_003436931.1
XP_003436932.1
NovelAGAP000179-RB2038543aaAGAP000179-PB
 
Protein coding
F5HJQ3 XM_003436883.1
XM_003436884.1
XP_003436931.1
XP_003436932.1
NovelAGAP000179-RA1910572aaAGAP000179-PA
 
Protein coding
F5HJQ3 Q7QEW3 XM_310956.5
XP_310956.5
Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,910 bps, Translation length: 572 residues

Version

AGAP000179-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays