Location
About this transcript

This transcript has 15 exons, is annotated with 107 domains and features, is associated with 224 variations and maps to 59 oligo probes.

Gene

This transcript is a product of gene AGAP000222 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000222-RA151814991aaAGAP000222-PA
 
Protein coding
F5HJP6 Q7PRT5 XM_001687714.1
XM_003436891.1
XM_310912.5
XP_003436939.1
XP_310912.5
NovelAGAP000222-RB150284952aaAGAP000222-PB
 
Protein coding
F5HJP6 XM_001687714.1
XM_003436891.1
XM_310912.5
XP_003436939.1
Statistics

Exons: 15, Coding exons: 15, Transcript length: 15,181 bps, Translation length: 4,991 residues

Version

AGAP000222-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays