Description

3',5'-cyclic-nucleotide phosphodiesterase [Source:VB External Description;Acc:AGAP000236]

Location
About this transcript

This transcript has 9 exons, is annotated with 27 domains and features, is associated with 8 variations and maps to 24 oligo probes.

Gene

This transcript is a product of gene AGAP000236 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000236-RB42891365aaAGAP000236-PB
 
Protein coding
F5HJN9 Q5TUZ0 XM_003436897.1
XM_003436898.1
XM_566154.4
XP_003436945.1
NovelAGAP000236-RC2739845aaAGAP000236-PC
 
Protein coding
F5HJP0 XM_003436898.1
XM_566154.4
XP_003436946.1
NovelAGAP000236-RA2669813aaAGAP000236-PA
 
Protein coding
Q5TUZ0 XM_003436898.1
XM_566154.4
XP_566154.4
Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,669 bps, Translation length: 813 residues

Version

AGAP000236-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays