Location
About this transcript

This transcript has 7 exons, is annotated with 35 domains and features, is associated with 74 variations and maps to 12 oligo probes.

Gene

This transcript is a product of gene AGAP000314 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000314-RB63242107aaAGAP000314-PB
 
Protein coding
F5HJL9 XM_003436918.1
XP_003436966.1
NovelAGAP000314-RA63152104aaAGAP000314-PA
 
Protein coding
F5HJL9 Q7PS34 XM_310807.5
XP_310807.5
Statistics

Exons: 7, Coding exons: 7, Transcript length: 6,324 bps, Translation length: 2,107 residues

Version

AGAP000314-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays