Description

Inositol polyphosphate-5-phosphatase F [Source:VB External Description;Acc:AGAP000483]

Location
About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 8 variations and maps to 7 oligo probes.

Gene

This transcript is a product of gene AGAP000483 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000483-RC34471148aaAGAP000483-PC
 
Protein coding
F5HJH8 XM_003436958.1
XM_003436959.1
XM_310609.4
XP_003437006.1
NovelAGAP000483-RA31231040aaAGAP000483-PA
 
Protein coding
F5HJH9 Q7QFH3 XM_003436958.1
XM_003436959.1
XM_310609.4
XP_003437007.1
XP_310609.4
NovelAGAP000483-RB2595623aaAGAP000483-PB
 
Protein coding
F5HJH9 XM_003436958.1
XM_003436959.1
XM_310609.4
XP_003437007.1
Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,595 bps, Translation length: 623 residues

Version

AGAP000483-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays