Description

AMP deaminase [Source:VB External Description;Acc:AGAP000577]

Location
About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 8 variations and maps to 39 oligo probes.

Gene

This transcript is a product of gene AGAP000577 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000577-RD2803782aaAGAP000577-PD
 
Protein coding
F5HJE6 XM_003436989.1
XP_003437037.1
NovelAGAP000577-RA2702795aaAGAP000577-PA
 
Protein coding
F5HJE8 H2KMF2 XM_310497.5
XP_310497.5
NovelAGAP000577-RC2357666aaAGAP000577-PC
 
Protein coding
F5HJE8 XM_003436991.1
XP_003437039.1
NovelAGAP000577-RB2299686aaAGAP000577-PB
 
Protein coding
F5HJE7 XM_003436990.1
XP_003437038.1
Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,299 bps, Translation length: 686 residues

Version

AGAP000577-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays