Description

casein kinase 1, alpha [Source:VB External Description;Acc:AGAP000627]

Location
About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 2 variations and maps to 33 oligo probes.

Gene

This transcript is a product of gene AGAP000627 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000627-RA2197331aaAGAP000627-PA
 
Protein coding
Q7QFR2 XM_001238804.3
XM_310450.5
XM_310451.5
XP_001238805.2
XP_310450.4
XP_310451.4
NovelAGAP000627-RB2165331aaAGAP000627-PB
 
Protein coding
Q7QFR2 XM_001238804.3
XM_310450.5
XM_310451.5
XP_001238805.2
XP_310450.4
XP_310451.4
NovelAGAP000627-RC1968331aaAGAP000627-PC
 
Protein coding
Q7QFR2 XM_001238804.3
XM_310450.5
XM_310451.5
XP_001238805.2
XP_310450.4
XP_310451.4
Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,197 bps, Translation length: 331 residues

Version

AGAP000627-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays