Description

Vesicle-associated membrane protein 7 [Source:VB External Description;Acc:AGAP000700]

Location
About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 8 variations and maps to 40 oligo probes.

Gene

This transcript is a product of gene AGAP000700 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000700-RB2405233aaAGAP000700-PB
 
Protein coding
F5HJV6 XM_003437020.1
XM_003437021.1
XM_311230.4
XP_003437068.1
XP_003437069.1
XP_311230.3
NovelAGAP000700-RC2339233aaAGAP000700-PC
 
Protein coding
F5HJV6 XM_003437020.1
XM_003437021.1
XM_311230.4
XP_003437068.1
XP_003437069.1
XP_311230.3
NovelAGAP000700-RA2308233aaAGAP000700-PA
 
Protein coding
F5HJV6 XM_003437020.1
XM_003437021.1
XM_311230.4
XP_003437068.1
XP_003437069.1
XP_311230.3
Statistics

Exons: 5, Coding exons: 3, Transcript length: 2,339 bps, Translation length: 233 residues

Version

AGAP000700-RC.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays