Description

integrin beta subunit [Source:VB Community Annotation;Acc:AGAP000815]

Location
About this transcript

This transcript has 6 exons, is annotated with 45 domains and features, is associated with 12 variations and maps to 34 oligo probes.

Gene

This transcript is a product of gene AGAP000815 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
INTBAGAP000815-RA4694837aaAGAP000815-PA
 
Protein coding
B6CA84 Q7QE55 Q9NAS7
XM_311354.5
XP_311354.2
Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,694 bps, Translation length: 837 residues

Version

AGAP000815-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays