Location
About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 4 variations and maps to 26 oligo probes.

Gene

This transcript is a product of gene AGAP000951 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000951-RA1307228aaAGAP000951-PA
 
Protein coding
Q7QI20 XM_001688114.1
XM_003437104.1
XM_309141.4
XP_001688166.1
XP_003437152.1
XP_309141.2
NovelAGAP000951-RB1298228aaAGAP000951-PB
 
Protein coding
Q7QI20 XM_001688114.1
XM_003437104.1
XM_309139.5
XM_309141.4
XP_001688166.1
XP_003437152.1
XP_309141.2
NovelAGAP000951-RC1277228aaAGAP000951-PC
 
Protein coding
Q7QI20 XM_001688114.1
XM_003437104.1
XM_309141.4
XP_001688166.1
XP_003437152.1
XP_309141.2
Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,277 bps, Translation length: 228 residues

Version

AGAP000951-RC.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays