Description

phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:VB External Description;Acc:AGAP000954]

Location
About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 2 variations and maps to 27 oligo probes.

Gene

This transcript is a product of gene AGAP000954 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000954-RA1936376aaAGAP000954-PA
 
Protein coding
F5HJ15 XM_003437107.1
XM_003437108.1
XM_003437109.1
XM_309146.4
XP_003437155.1
XP_003437156.1
XP_309146.4
NovelAGAP000954-RB1912376aaAGAP000954-PB
 
Protein coding
F5HJ15 F5HJ16 XM_003437107.1
XM_003437108.1
XM_003437109.1
XM_309146.4
XP_003437155.1
XP_003437156.1
XP_309146.4
NovelAGAP000954-RC1884376aaAGAP000954-PC
 
Protein coding
F5HJ15 XM_003437107.1
XM_003437108.1
XM_003437109.1
XM_309146.4
XP_003437155.1
XP_003437156.1
XP_309146.4
NovelAGAP000954-RD1447355aaAGAP000954-PD
 
Protein coding
F5HJ16 XM_003437107.1
XM_003437108.1
XM_003437109.1
XM_309146.4
XP_003437157.1
Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,912 bps, Translation length: 376 residues

Version

AGAP000954-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays