Description

tropomodulin [Source:VB External Description;Acc:AGAP000969]

Location
About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 8 variations and maps to 19 oligo probes.

Gene

This transcript is a product of gene AGAP000969 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000969-RD2385432aaAGAP000969-PD
 
Protein coding
F5HJ18 XM_003437111.1
XM_003437112.1
XP_003437159.1
XP_003437160.1
NovelAGAP000969-RE2376366aaAGAP000969-PE
 
Protein coding
F5HJ17 XM_003437110.1
XP_003437158.1
NovelAGAP000969-RB2212432aaAGAP000969-PB
 
Protein coding
F5HJ18 XM_003437111.1
XM_003437112.1
XP_003437159.1
XP_003437160.1
NovelAGAP000969-RC1950390aaAGAP000969-PC
 
Protein coding
F5HJ20 XM_003437113.1
XP_003437161.1
NovelAGAP000969-RA1429415aaAGAP000969-PA
 
Protein coding
F5HJ20 Q7PFC9 XM_309162.5
XP_309162.5
Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,385 bps, Translation length: 432 residues

Version

AGAP000969-RD.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays