Description

putative gastrin/cholecystokinin receptor 1 [Source:VB Community Annotation;Acc:AGAP001022]

Location
About this transcript

This transcript has 6 exons, is annotated with 33 domains and features, is associated with 14 variations and maps to 25 oligo probes.

Gene

This transcript is a product of gene AGAP001022 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
GPRCCK1AGAP001022-RA1905634aaAGAP001022-PA
 
Protein coding
Q69DS3 XM_001237202.1
XM_309215.3
XP_001237203.1
GPRCCK1AGAP001022-RB1656551aaAGAP001022-PB
 
Protein coding
Q7QHX9 XM_001237202.1
XM_309215.3
XP_309215.4
Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,905 bps, Translation length: 634 residues

Version

AGAP001022-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays