Location
About this transcript

This transcript has 7 exons, is annotated with 13 domains and features, is associated with 1 variation and maps to 25 oligo probes.

Gene

This transcript is a product of gene AGAP001053 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001053-RC1364197aaAGAP001053-PC
 
Protein coding
A7UTK6 XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_001688628.1
NovelAGAP001053-RF1364197aaAGAP001053-PF
 
Protein coding
F5HLW0 XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_003437194.1
NovelAGAP001053-RH1364197aaAGAP001053-PH
 
Protein coding
F5HLW1 XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_003437193.1
NovelAGAP001053-RA938210aaAGAP001053-PA
 
Protein coding
B1Q289 F5HLW1 Q7PI45
XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_003437190.1
XP_003437193.1
XP_315309.4
NovelAGAP001053-RB938210aaAGAP001053-PB
 
Protein coding
A7UTK5 F5HLW0 Q3B717
XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_001688627.1
XP_003437194.1
NovelAGAP001053-RD938210aaAGAP001053-PD
 
Protein coding
F5HLV8 XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_003437191.1
XP_003437192.1
NovelAGAP001053-RE914210aaAGAP001053-PE
 
Protein coding
Q7PI45 XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_003437190.1
XP_315309.4
NovelAGAP001053-RG914210aaAGAP001053-PG
 
Protein coding
A7UTK6 F5HLV8 Q3B716
XM_001688575.2
XM_001688576.2
XM_003437142.1
XM_003437143.1
XM_003437144.1
XM_003437145.1
XM_003437146.1
XM_315309.5
XP_001688628.1
XP_003437191.1
XP_003437192.1
Statistics

Exons: 7, Coding exons: 6, Transcript length: 914 bps, Translation length: 210 residues

Version

AGAP001053-RG.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays