Location
About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 10 variations and maps to 32 oligo probes.

Gene

This transcript is a product of gene AGAP001073 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001073-RC2240576aaAGAP001073-PC
 
Protein coding
F5HM07 XM_001689060.1
XM_003437156.1
XM_003437157.1
XM_318279.5
XP_003437204.1
NovelAGAP001073-RB1871542aaAGAP001073-PB
 
Protein coding
F5HM08 XM_001689060.1
XM_003437156.1
XM_003437157.1
XM_318279.5
XP_003437205.1
NovelAGAP001073-RA1762499aaAGAP001073-PA
 
Protein coding
Q7Q2G4 XM_001689060.1
XM_003437156.1
XM_003437157.1
XM_318279.5
XP_318279.4
Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,240 bps, Translation length: 576 residues

Version

AGAP001073-RC.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays