Description

cytochrome P450 (CYP4G16) [Source:VB Community Annotation;Acc:AGAP001076]

Synonyms

CYPs1x5

Location
About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 7 variations and maps to 42 oligo probes.

Gene

This transcript is a product of gene AGAP001076 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
CYP4G16AGAP001076-RD2757525aaAGAP001076-PD
 
Protein coding
F5HL85 Q8WQN2 XM_003437160.1
XP_003437208.1
CYP4G16AGAP001076-RB2574565aaAGAP001076-PB
 
Protein coding
F5HL83 XM_003437158.1
XM_003437159.1
XM_558699.6
XP_003437206.1
XP_003437207.1
XP_558699.5
CYP4G16AGAP001076-RA2493565aaAGAP001076-PA
 
Protein coding
F5HL83 V5T6Q9 XM_003437158.1
XM_003437159.1
XM_558699.6
XP_003437206.1
XP_003437207.1
XP_558699.5
CYP4G16AGAP001076-RC2481565aaAGAP001076-PC
 
Protein coding
F5HL83 XM_003437158.1
XM_003437159.1
XM_558699.6
XP_003437206.1
XP_003437207.1
XP_558699.5
Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,757 bps, Translation length: 525 residues

Version

AGAP001076-RD.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays