Description

saposin [Source:VB External Description;Acc:AGAP001082]

Location
About this transcript

This transcript has 6 exons, is annotated with 58 domains and features, is associated with 16 variations and maps to 20 oligo probes.

Gene

This transcript is a product of gene AGAP001082 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001082-RB35711007aaAGAP001082-PB
 
Protein coding
F5HM00 XM_003437161.1
XP_003437209.1
NovelAGAP001082-RA35681006aaAGAP001082-PA
 
Protein coding
Q7PMW6 XM_317975.4
XP_317975.4
Statistics

Exons: 6, Coding exons: 5, Transcript length: 3,568 bps, Translation length: 1,006 residues

Version

AGAP001082-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays