Description

AMP-activated protein kinase, gamma regulatory subunit [Source:VB External Description;Acc:AGAP001446]

Location
About this transcript

This transcript has 11 exons, is annotated with 47 domains and features, is associated with 61 variations and maps to 38 oligo probes.

Gene

This transcript is a product of gene AGAP001446 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001446-RB40051334aaAGAP001446-PB
 
Protein coding
F5HMQ3 Q380G8 XM_003435788.1
XP_003435836.1
NovelAGAP001446-RA3229741aaAGAP001446-PA
 
Protein coding
Q380G8 XM_551386.4
XP_551386.4
NovelAGAP001446-RE2715904aaAGAP001446-PE
 
Protein coding
F5HMQ4 XM_003435789.1
XP_003435837.1
NovelAGAP001446-RC2669888aaAGAP001446-PC
 
Protein coding
F5HMQ2 XM_003435787.1
XP_003435835.1
NovelAGAP001446-RD1689562aaAGAP001446-PD
 
Protein coding
F5HMQ6 XM_003435790.1
XP_003435838.1
Statistics

Exons: 11, Coding exons: 11, Transcript length: 4,005 bps, Translation length: 1,334 residues

Version

AGAP001446-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays