Location
About this transcript

This transcript has 9 exons, is annotated with 52 domains and features, is associated with 119 variations and maps to 52 oligo probes.

Gene

This transcript is a product of gene AGAP001451 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001451-RC63452114aaAGAP001451-PC
 
Protein coding
F5HMP9 XM_003435793.1
XP_003435841.1
NovelAGAP001451-RB56611886aaAGAP001451-PB
 
Protein coding
F5HMP9 F5HMQ0 XM_003435794.1
XP_003435842.1
NovelAGAP001451-RA39961331aaAGAP001451-PA
 
Protein coding
F5HMP9 F5HMQ0 Q7PKP4
XM_321674.5
XP_321674.5
Statistics

Exons: 9, Coding exons: 9, Transcript length: 5,661 bps, Translation length: 1,886 residues

Version

AGAP001451-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays