Description

60S ribosomal protein L17 [Source:VB Community Annotation;Acc:AGAP001459]

Location
About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 4 variations and maps to 47 oligo probes.

Gene

This transcript is a product of gene AGAP001459 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
RpL17AGAP001459-RA762187aaAGAP001459-PA
 
Protein coding
A0NGY0 F5HMP6 XM_003435796.1
XM_003435797.1
XM_551371.4
XP_003435844.1
XP_003435845.1
XP_551371.1
RpL17AGAP001459-RB729187aaAGAP001459-PB
 
Protein coding
A0NGY0 F5HMP6 XM_003435796.1
XM_003435797.1
XM_551371.4
XP_003435844.1
XP_003435845.1
XP_551371.1
RpL17AGAP001459-RC719187aaAGAP001459-PC
 
Protein coding
A0NGY0 F5HMP6 XM_003435796.1
XM_003435797.1
XM_551371.4
XP_003435844.1
XP_003435845.1
XP_551371.1
Statistics

Exons: 3, Coding exons: 2, Transcript length: 729 bps, Translation length: 187 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0NGY0

Version

AGAP001459-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays