Location
About this transcript

This transcript has 9 exons, is annotated with 41 domains and features, is associated with 114 variations and maps to 51 oligo probes.

Gene

This transcript is a product of gene AGAP001480 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001480-RB46971311aaAGAP001480-PB
 
Protein coding
F5HMP2 XM_003435799.1
XM_003435800.1
XM_003435801.1
XM_321644.3
XP_003435847.1
XP_003435848.1
XP_003435849.1
NovelAGAP001480-RC44081311aaAGAP001480-PC
 
Protein coding
F5HMP2 XM_003435799.1
XM_003435800.1
XM_003435801.1
XM_321644.3
XP_003435847.1
XP_003435848.1
XP_003435849.1
NovelAGAP001480-RD43471311aaAGAP001480-PD
 
Protein coding
F5HMP2 XM_003435799.1
XM_003435800.1
XM_003435801.1
XM_321644.3
XP_003435847.1
XP_003435848.1
XP_003435849.1
NovelAGAP001480-RA2765730aaAGAP001480-PA
 
Protein coding
Q7PKQ0 XM_321644.3
XP_321644.3
Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,408 bps, Translation length: 1,311 residues

Version

AGAP001480-RC.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays