Description

Alpha-actinin, sarcomeric [Source:VB External Description;Acc:AGAP001497]

Location
About this transcript

This transcript has 12 exons, is annotated with 49 domains and features, is associated with 13 variations and maps to 39 oligo probes.

Gene

This transcript is a product of gene AGAP001497 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001497-RA4208922aaAGAP001497-PA
 
Protein coding
Q7PKQ5 XM_321625.5
XP_321625.2
NovelAGAP001497-RB4133897aaAGAP001497-PB
 
Protein coding
F5HMN8 XM_003435805.1
XP_003435853.1
NovelAGAP001497-RC4133897aaAGAP001497-PC
 
Protein coding
F5HMN9 XM_003435804.1
XP_003435852.1
Statistics

Exons: 12, Coding exons: 11, Transcript length: 4,208 bps, Translation length: 922 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7PKQ5

Version

AGAP001497-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays