Description

Regucalcin protein [Source:VB External Description;Acc:AGAP001501]

Location
About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 15 variations and maps to 27 oligo probes.

Gene

This transcript is a product of gene AGAP001501 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001501-RA1253364aaAGAP001501-PA
 
Protein coding
F5HMN5 Q7PXN9 XM_003435807.1
XM_003435808.1
XM_321620.5
XP_003435855.1
XP_003435856.1
XP_321620.4
NovelAGAP001501-RB1029310aaAGAP001501-PB
 
Protein coding
F5HMN5 XM_003435807.1
XM_003435808.1
XM_321620.5
XP_003435855.1
XP_003435856.1
NovelAGAP001501-RC1019310aaAGAP001501-PC
 
Protein coding
F5HMN5 XM_003435807.1
XM_003435808.1
XM_321620.5
XP_003435855.1
XP_003435856.1
Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,019 bps, Translation length: 310 residues

Version

AGAP001501-RC.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays