Description

Transmembrane emp24 protein transport domain containing 1b [Source:VB External Description;Acc:AGAP001505]

Location
About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 8 variations and maps to 28 oligo probes.

Gene

This transcript is a product of gene AGAP001505 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001505-RB1356247aaAGAP001505-PB
 
Protein coding
A0NH34 XM_001238513.2
XM_003435809.1
XM_321617.5
XP_001238514.1
XP_003435857.1
NovelAGAP001505-RA1247247aaAGAP001505-PA
 
Protein coding
A0NH34 XM_001238513.2
XM_003435809.1
XM_321617.5
XP_001238514.1
XP_003435857.1
Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,247 bps, Translation length: 247 residues

Version

AGAP001505-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays