Description

Stress-associated endoplasmic reticulum protein 2 [Source:VB External Description;Acc:AGAP001548]

Location
About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 1 variation and maps to 41 oligo probes.

Gene

This transcript is a product of gene AGAP001548 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001548-RB96764aaAGAP001548-PB
 
Protein coding
F5HMM3 XM_003435819.1
XM_003435820.1
XM_321574.4
XP_003435867.1
XP_003435868.1
XP_321574.1
NovelAGAP001548-RC91964aaAGAP001548-PC
 
Protein coding
F5HMM3 XM_003435819.1
XM_003435820.1
XM_321574.4
XP_003435867.1
XP_003435868.1
XP_321574.1
NovelAGAP001548-RA86864aaAGAP001548-PA
 
Protein coding
F5HMM3 XM_003435819.1
XM_003435820.1
XM_321574.4
XP_003435867.1
XP_003435868.1
XP_321574.1
Statistics

Exons: 3, Coding exons: 1, Transcript length: 967 bps, Translation length: 64 residues

Version

AGAP001548-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays