Location
About this transcript

This transcript has 15 exons, is annotated with 40 domains and features, is associated with 121 variations and maps to 73 oligo probes.

Gene

This transcript is a product of gene AGAP001608 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001608-RA50881646aaAGAP001608-PA
 
Protein coding
Q7PUM7 Q8T5H0 XM_321492.4
XP_321492.4
Statistics

Exons: 15, Coding exons: 15, Transcript length: 5,088 bps, Translation length: 1,646 residues

Version

AGAP001608-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays