Description

proline synthetase co-transcribed homolog [Source:VB External Description;Acc:AGAP001621]

Location
About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 12 variations and maps to 23 oligo probes.

Gene

This transcript is a product of gene AGAP001621 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001621-RB1304260aaAGAP001621-PB
 
Protein coding
Q7PXV8 XM_003435841.1
XM_321478.5
XP_003435889.1
XP_321478.5
NovelAGAP001621-RA1246260aaAGAP001621-PA
 
Protein coding
Q7PXV8 XM_003435841.1
XM_321478.5
XM_321479.2
XP_003435889.1
XP_321478.5
Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,246 bps, Translation length: 260 residues

Version

AGAP001621-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays