Location
About this transcript

This transcript has 4 exons, is annotated with 28 domains and features, is associated with 37 variations and maps to 33 oligo probes.

Gene

This transcript is a product of gene AGAP001677 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001677-RC2105677aaAGAP001677-PC
 
Protein coding
F5HMJ3 XM_001689279.1
XM_003435850.1
XM_321418.5
XP_003435898.1
NovelAGAP001677-RA2042656aaAGAP001677-PA
 
Protein coding
F5HMJ3 Q4JSB8 Q7PXZ9
XM_001689279.1
XM_003435850.1
XM_321418.5
XP_321418.4
NovelAGAP001677-RB959295aaAGAP001677-PB
 
Protein coding
Q4JSB9 XM_001689279.1
XM_003435850.1
XM_321418.5
XP_001689331.1
Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,042 bps, Translation length: 656 residues

Version

AGAP001677-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays