Description

stearoyl-CoA desaturase (delta-9 desaturase) [Source:VB External Description;Acc:AGAP001713]

Location
About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 6 variations and maps to 74 oligo probes.

Gene

This transcript is a product of gene AGAP001713 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001713-RD3284355aaAGAP001713-PD
 
Protein coding
F5HMH9 XM_003435863.1
XM_003435864.1
XM_003435865.1
XM_321375.5
XP_003435911.1
XP_003435912.1
XP_003435913.1
XP_321375.3
NovelAGAP001713-RB3255355aaAGAP001713-PB
 
Protein coding
F5HMH9 XM_003435863.1
XM_003435864.1
XM_003435865.1
XM_321375.5
XP_003435911.1
XP_003435912.1
XP_003435913.1
XP_321375.3
NovelAGAP001713-RC3039355aaAGAP001713-PC
 
Protein coding
F5HMH9 XM_003435863.1
XM_003435864.1
XM_003435865.1
XM_321375.5
XP_003435911.1
XP_003435912.1
XP_003435913.1
XP_321375.3
NovelAGAP001713-RA2988355aaAGAP001713-PA
 
Protein coding
F5HMH9 XM_003435863.1
XM_003435864.1
XM_003435865.1
XM_321375.5
XP_003435911.1
XP_003435912.1
XP_003435913.1
XP_321375.3
Statistics

Exons: 5, Coding exons: 4, Transcript length: 3,284 bps, Translation length: 355 residues

Version

AGAP001713-RD.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays