Location
About this transcript

This transcript has 15 exons, is annotated with 48 domains and features, is associated with 84 variations and maps to 28 oligo probes.

Gene

This transcript is a product of gene AGAP001935 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001935-RB51651414aaAGAP001935-PB
 
Protein coding
F5HMC0 XM_003435923.1
XP_003435971.1
NovelAGAP001935-RA51061552aaAGAP001935-PA
 
Protein coding
Q7PUU6 XM_003435923.1
XM_321129.5
XP_321129.5
Statistics

Exons: 15, Coding exons: 15, Transcript length: 5,106 bps, Translation length: 1,552 residues

Version

AGAP001935-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays