Description

Matrix metallopeptidase 16 (membrane-inserted) [Source:VB External Description;Acc:AGAP003929]

Location
About this transcript

This transcript has 8 exons, is annotated with 34 domains and features, is associated with 43 variations and maps to 35 oligo probes.

Gene

This transcript is a product of gene AGAP003929 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP003929-RA2228682aaAGAP003929-PA
 
Protein coding
Q5TPJ3 XM_554330.4
XP_554330.4
Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,228 bps, Translation length: 682 residues

Version

AGAP003929-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays