Description

Fimbrin [Source:VB External Description;Acc:AGAP004071]

Location
About this transcript

This transcript has 5 exons, is annotated with 36 domains and features, is associated with 25 variations and maps to 24 oligo probes.

Gene

This transcript is a product of gene AGAP004071 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004071-RC2640658aaAGAP004071-PC
 
Protein coding
Q7QH58 XM_003436657.1
XM_003436658.1
XM_309626.4
XP_003436705.1
XP_309626.4
NovelAGAP004071-RA2601658aaAGAP004071-PA
 
Protein coding
Q7QH58 XM_003436657.1
XM_003436658.1
XM_309625.4
XM_309626.4
XP_003436705.1
XP_309626.4
NovelAGAP004071-RB2561656aaAGAP004071-PB
 
Protein coding
F5HJ59 XM_003436658.1
XP_003436706.1
Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,561 bps, Translation length: 656 residues

Version

AGAP004071-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays