Description

DNA topoisomerase I [Source:VB External Description;Acc:AGAP004078]

Location
About this transcript

This transcript has 5 exons, is annotated with 27 domains and features, is associated with 25 variations and maps to 24 oligo probes.

Gene

This transcript is a product of gene AGAP004078 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004078-RA32921088aaAGAP004078-PA
 
Protein coding
Q7QH57 XM_309629.5
XP_309629.5
NovelAGAP004078-RB1923581aaAGAP004078-PB
 
Protein coding
F5HJ60 XM_003436659.1
XP_003436707.1
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,923 bps, Translation length: 581 residues

Version

AGAP004078-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays