Description

pre-mRNA-splicing factor [Source:VB External Description;Acc:AGAP004225]

Location
About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 25 variations and maps to 21 oligo probes.

Gene

This transcript is a product of gene AGAP004225 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004225-RA763242aaAGAP004225-PA
 
Protein coding
Q7PH03 XM_003436696.1
XM_313133.4
XP_313133.4
NovelAGAP004225-RB746248aaAGAP004225-PB
 
Protein coding
F5HL57 XM_003436696.1
XP_003436744.1
Statistics

Exons: 4, Coding exons: 4, Transcript length: 763 bps, Translation length: 242 residues

Version

AGAP004225-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays