Description

cryptochrome 2 [Source:VB Community Annotation;Acc:AGAP004261]

Location
About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 78 variations and maps to 55 oligo probes.

Gene

This transcript is a product of gene AGAP004261 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
CRY2AGAP004261-RC38581056aaAGAP004261-PC
 
Protein coding
F5HL76 XM_003436715.1
XM_003436716.1
XM_313179.4
XP_003436763.1
XP_003436764.1
XP_313179.4
CRY2AGAP004261-RB36741056aaAGAP004261-PB
 
Protein coding
F5HL76 XM_003436715.1
XM_003436716.1
XM_313179.4
XP_003436763.1
XP_003436764.1
XP_313179.4
CRY2AGAP004261-RA35421056aaAGAP004261-PA
 
Protein coding
F5HL76 Q0QW07 XM_003436715.1
XM_003436716.1
XM_313179.4
XP_003436763.1
XP_003436764.1
XP_313179.4
Statistics

Exons: 6, Coding exons: 4, Transcript length: 3,674 bps, Translation length: 1,056 residues

Version

AGAP004261-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays