Description

filamin [Source:VB External Description;Acc:AGAP004335]

Location
About this transcript

This transcript has 9 exons, is annotated with 50 domains and features, is associated with 38 variations and maps to 49 oligo probes.

Gene

This transcript is a product of gene AGAP004335 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004335-RA84392488aaAGAP004335-PA
 
Protein coding
Q7PQ75 XM_003436740.1
XM_003436741.1
XM_313613.5
XP_313613.5
NovelAGAP004335-RB3912979aaAGAP004335-PB
 
Protein coding
F5HLL3 F5HLL4 XM_003436740.1
XM_003436741.1
XP_003436788.1
NovelAGAP004335-RC3531838aaAGAP004335-PC
 
Protein coding
F5HLL4 XM_003436741.1
XP_003436789.1
Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,912 bps, Translation length: 979 residues

Version

AGAP004335-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays