Description

Leucine-rich repeat-containing protein 58 [Source:VB External Description;Acc:AGAP004458]

Location
About this transcript

This transcript has 6 exons, is annotated with 33 domains and features, is associated with 13 variations and maps to 31 oligo probes.

Gene

This transcript is a product of gene AGAP004458 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004458-RB1929356aaAGAP004458-PB
 
Protein coding
F5HLP7 XM_003436774.1
XM_003436775.1
XM_313752.5
XP_003436822.1
XP_003436823.1
XP_313752.4
NovelAGAP004458-RC1705356aaAGAP004458-PC
 
Protein coding
F5HLP7 XM_003436774.1
XM_003436775.1
XM_313752.5
XP_003436822.1
XP_003436823.1
XP_313752.4
NovelAGAP004458-RA1691356aaAGAP004458-PA
 
Protein coding
F5HLP7 XM_003436774.1
XM_003436775.1
XM_313752.5
XP_003436822.1
XP_003436823.1
XP_313752.4
Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,705 bps, Translation length: 356 residues

Version

AGAP004458-RC.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays