Description

Protein yellow [Source:VB External Description;Acc:AGAP004549]

Location
About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 9 variations and maps to 29 oligo probes.

Gene

This transcript is a product of gene AGAP004549 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004549-RA1726440aaAGAP004549-PA
 
Protein coding
F5HLH6 XM_001238820.3
XM_003436789.1
XM_003436790.1
XP_001238821.3
XP_003436837.1
XP_003436838.1
NovelAGAP004549-RC1704440aaAGAP004549-PC
 
Protein coding
F5HLH6 XM_001238820.3
XM_003436789.1
XM_003436790.1
XP_001238821.3
XP_003436837.1
XP_003436838.1
NovelAGAP004549-RB1429440aaAGAP004549-PB
 
Protein coding
F5HLH6 XM_001238820.3
XM_003436789.1
XM_003436790.1
XP_001238821.3
XP_003436837.1
XP_003436838.1
Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,704 bps, Translation length: 440 residues

Version

AGAP004549-RC.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays