Description

splicing factor, arginine/serine-rich 4/5/6 [Source:VB External Description;Acc:AGAP004592]

Location
About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 2 variations and maps to 21 oligo probes.

Gene

This transcript is a product of gene AGAP004592 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004592-RA1424345aaAGAP004592-PA
 
Protein coding
Q7PPE6 XM_003436813.1
XM_315232.5
XP_003436861.1
XP_315232.3
NovelAGAP004592-RE1412351aaAGAP004592-PE
 
Protein coding
F5HLU5 XM_003436812.1
XP_003436860.1
NovelAGAP004592-RH1394345aaAGAP004592-PH
 
Protein coding
Q7PPE6 XM_003436813.1
XM_315232.5
XP_003436861.1
XP_315232.3
NovelAGAP004592-RI972214aaAGAP004592-PI
 
Protein coding
F5HLU5 F5HLV2 Q7PPE6
XM_003436812.1
XM_003436813.1
XM_003436814.1
XM_315232.5
XP_003436860.1
XP_003436861.1
XP_003436862.1
XP_315232.3
NovelAGAP004592-RB800149aaAGAP004592-PB
 
Protein coding
F5HLV0 XM_003436818.1
XM_003436819.1
XP_003436866.1
XP_003436867.1
NovelAGAP004592-RF770149aaAGAP004592-PF
 
Protein coding
F5HLV0 XM_003436818.1
XM_003436819.1
XP_003436866.1
XP_003436867.1
NovelAGAP004592-RG764132aaAGAP004592-PG
 
Protein coding
F5HLU9 XM_003436816.1
XM_003436817.1
XP_003436864.1
XP_003436865.1
NovelAGAP004592-RD752138aaAGAP004592-PD
 
Protein coding
F5HLU7 XM_003436815.1
XP_003436863.1
NovelAGAP004592-RC734132aaAGAP004592-PC
 
Protein coding
F5HLU9 XM_003436816.1
XM_003436817.1
XP_003436864.1
XP_003436865.1
Statistics

Exons: 6, Coding exons: 5, Transcript length: 752 bps, Translation length: 138 residues

Version

AGAP004592-RD.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays