Description

nuclear pore complex protein Nup160 [Source:VB External Description;Acc:AGAP004671]

Location
About this transcript

This transcript has 13 exons, is annotated with 4 domains and features, is associated with 16 variations and maps to 68 oligo probes.

Gene

This transcript is a product of gene AGAP004671 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP004671-RA41711346aaAGAP004671-PA
 
Protein coding
Q5TRX4 XM_003436841.1
XM_557517.6
XP_557517.4
Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,171 bps, Translation length: 1,346 residues

Version

AGAP004671-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays