Description

PH-sensitive chloride channel [Source:VB External Description;Acc:AGAP005599]

Location
About this transcript

This transcript has 12 exons, is annotated with 24 domains and features, is associated with 29 variations and maps to 19 oligo probes.

Gene

This transcript is a product of gene AGAP005599 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP005599-RG2998740aaAGAP005599-PG
 
Protein coding
A0A1S4GPQ0 A0A1S4GQD8 Q7Q6Y7
XM_001688639.1
XM_315611.3
NovelAGAP005599-RB2947723aaAGAP005599-PB
 
Protein coding
A0A1S4GQD2 A7UTS4 XM_001688639.1
XM_315611.3
NovelAGAP005599-RC2947723aaAGAP005599-PC
 
Protein coding
A0A1S4GQH6 XM_001688639.1
XM_315611.3
NovelAGAP005599-RA2911711aaAGAP005599-PA
 
Protein coding
A0A1S4GPR9 XM_001688639.1
XM_315611.3
NovelAGAP005599-RE2860694aaAGAP005599-PE
 
Protein coding
A0A1S4GPQ4 XM_001688639.1
XM_315611.3
NovelAGAP005599-RI1974657aaAGAP005599-PI
 
Protein coding
A0A1S4GPS2 XM_001688639.1
XM_315611.3
NovelAGAP005599-RK1554517aaAGAP005599-PK
 
Protein coding
A0A1S4GQD8 XM_001688639.1
XM_315611.3
Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,998 bps, Translation length: 740 residues

Version

AGAP005599-RG.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays