Description

laminin, alpha 1/2 [Source:VB External Description;Acc:AGAP007849]

Location
About this transcript

This transcript has 19 exons, is annotated with 160 domains and features, is associated with 331 variations and maps to 64 oligo probes.

Gene

This transcript is a product of gene AGAP007849 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
NovelAGAP007849-RA105793230aaAGAP007849-PA
 
Protein coding
A0A1S4GX69 Q5TQ35 Q7PN80
NovelAGAP007849-RB87492870aaAGAP007849-PB
 
Protein coding
A0A1S4GWE4
Statistics

Exons: 19, Coding exons: 19, Transcript length: 8,749 bps, Translation length: 2,870 residues

Version

AGAP007849-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays