Description

Spire [Source:VB External Description;Acc:AGAP008100]

Location
About this transcript

This transcript has 15 exons, is annotated with 24 domains and features, is associated with 78 variations and maps to 32 oligo probes.

Gene

This transcript is a product of gene AGAP008100 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008100-RA34831160aaAGAP008100-PA
 
Protein coding
A0A1S4GX95 Q7PJ49 XM_317356.3
XP_317356.3
NovelAGAP008100-RB34291142aaAGAP008100-PB
 
Protein coding
A0A1S4GXA3 A7UUQ0 Q7Q3Y6
XM_001688970.1
XM_317355.4
XP_001689022.1
XP_317355.4
Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,429 bps, Translation length: 1,142 residues

Version

AGAP008100-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays