Description

Niemann-Pick C1 protein [Source:VB External Description;Acc:AGAP008137]

Location
About this transcript

This transcript has 8 exons, is annotated with 40 domains and features, is associated with 138 variations and maps to 33 oligo probes.

Gene

This transcript is a product of gene AGAP008137 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008137-RA49571306aaAGAP008137-PA
 
Protein coding
A0A1S4GY27 Q7Q409 XM_317322.4
NovelAGAP008137-RB48741599aaAGAP008137-PB
 
Protein coding
A0A1S4GY52 XM_317322.4
Statistics

Exons: 8, Coding exons: 8, Transcript length: 4,874 bps, Translation length: 1,599 residues

Version

AGAP008137-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays