Description

D7 short form salivary protein [Source:VB Community Annotation;Acc:AGAP008281]

Location
About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 18 variations and maps to 22 oligo probes.

Gene

This transcript is a product of gene AGAP008281 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
D7r4AGAP008281-RA602165aaAGAP008281-PA
 
Protein coding
Q7PNF2 Q9BIH3 XM_317185.2
XP_317185.1
Statistics

Exons: 3, Coding exons: 3, Transcript length: 602 bps, Translation length: 165 residues

Version

AGAP008281-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays