Location
About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 20 variations and maps to 44 oligo probes.

Gene

This transcript is a product of gene AGAP008310 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008310-RB2104457aaAGAP008310-PB
 
Protein coding
A0A1S4GXW2 A7UUK9 XM_001688952.1
XM_317156.3
XP_001689004.1
NovelAGAP008310-RA2065444aaAGAP008310-PA
 
Protein coding
A0A1S4GYM8 Q7Q4A4 XM_317156.3
XP_317156.3
NovelAGAP008310-RF2059442aaAGAP008310-PF
 
Protein coding
A0A1S4GXW9 XM_317156.3
NovelAGAP008310-RD1798272aaAGAP008310-PD
 
Protein coding
A0A1S4GXX0 XM_317156.3
Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,104 bps, Translation length: 457 residues

Version

AGAP008310-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays